DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs
نویسندگان
چکیده
منابع مشابه
DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs
Although the information of cDNAs is indispensable for analyzing gene function, most of the cDNA sequences stored in current databases are imperfect in the sense that they lack the precise information of 5' end termini. To overcome this difficulty, we have developed the oligo-capping method to obtain full-length cDNAs, the information of which has been partly deposited in public databases. In t...
متن کاملDBTSS : DataBase of Human Transcriptional Start Sites and Full-Length cDNA
Although a large number of new genes were predicted from the draft sequence of human genome, the need in cDNA analyses is still unchanged in order to locate correctly the position of genes and to examine their regulatory regions. First, correctly determined transcriptional start sites (TSS) position of a gene enables us to examine its regulatory region more precisely. It is reported that one ge...
متن کاملDBTSS: DataBase of Transcriptional Start Sites progress report in 2012
To support transcriptional regulation studies, we have constructed DBTSS (DataBase of Transcriptional Start Sites), which contains exact positions of transcriptional start sites (TSSs), determined with our own technique named TSS-seq, in the genomes of various species. In its latest version, DBTSS covers the data of the majority of human adult and embryonic tissues: it now contains 418 million ...
متن کاملDBTSS: DataBase of Human Transcription Start Sites, progress report 2006
DBTSS was first constructed in 2002 based on precise, experimentally determined 5' end clones. Several major updates and additions have been made since the last report. First, the number of human clones has drastically increased, going from 190,964 to 1,359,000. Second, information about potential alternative promoters is presented because the number of 5' end clones is now sufficient to determ...
متن کاملConstruction of mate pair full-length cDNAs libraries and characterization of transcriptional start sites and termination sites
To identify and characterize transcript structures ranging from transcriptional start sites (TSSs) to poly(A)-addition sites (PASs), we constructed and analyzed human TSS/PAS mate pair full-length cDNA libraries from 14 tissue types and four cell lines. The collected information enabled us to define TSS cluster (TSC) and PAS cluster (PAC) relationships for a total of 8530/9400 RefSeq genes, as ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 2002
ISSN: 1362-4962
DOI: 10.1093/nar/30.1.328